Publications



Articles

A Role for Ubiquitin in the Spliceosome Assembly Pathway
Bellare, P., Small, E.C., Huang, X., Wohlschlegel, J.A., Staley, J.P. & Sontheimer, E.J.
Nautre Struct Mol Biol 2008, 15(5):444-51.
[Abstract] [Full Text] [News and Views]

U2 toggles iteratively between the stem IIa and stem IIc conformations to promote pre-mRNA splicing
Hilliker, A.K., Mefford, M A. & Staley, J.P.
Genes Dev 2007, 21(7):821-834.
[Abstract] [Full Text]
DEAD on
Mayas, R.M. & Staley, J.P.
Nature Struct Mol Biol 2006, 13:954-955.
[Full Text]

The EF-G-like GTPase Snu114 Regulates Spliceosome Dynamics Mediated by Brr2p, a DExD/H-box ATPase
Small, E.C., Leggett, S.R., Winans, A.A. & Staley, J.P.
Molecular Cell 2006, 23(3):389-99.
[Abstract] [Full Text]

Exon ligation is proofread by the DExD/H-box ATPase Prp22p
Mayas, R.M., Maita, H. and Staley, J. P.
Nature Struct Mol Biol 2006, 13:482-490.
[Abstract] [Full Text] [News and Views]

The splicing factor Prp43p, a DEAH box ATPase, functions in ribosome biogenesis
Leeds, N.B., Small, E.C., Hiley, S.L., Hughes, T.R. and Staley, J. P.
Mol Cell Biol 2006, 26:513-22. 
[Abstract] [Full Text]

Multiple functions for the invariant AGC triad of U6 snRNA
Hilliker, A.K. and Staley, J. P.
RNA 2004, 10:921-928. 
[Abstract] [Full Text]

Hanging on to the branch
Staley, J. P.
Nat Struct Biol 2002, 9:5-7. 
[Full Text]
Specific alterations of U1-C protein or U1 small nuclear RNA can eliminate the requirement of Prp28p, an essential DEAD box splicing factor.
Chen, J. Y.-F., Stands, L. Staley, J. P., Jackups, R. R., Jr. and Chang, T. -H. 
Molecular Cell 2001, 7:227.
[Abstract] [Full Text] 
Reviewed in Nature Structural Biology, Vol. 8, No. 2, 113-116, February, 2001
An RNA switch at the 5' splice site requires ATP and the DEAD box protein Prp28p. 
Staley, J. P. & Guthrie, C. 
Molecular Cell 1999, 3:55-64.
[Abstract] [Full Text]
Reviewed in Cell, Vol. 96, 599Ð602, March, 1999.
Mechanical devices of the spliceosome: motors, clocks, springs and things. 
Staley, J. P. & Guthrie, C. 
Cell 1998, 92:315-326.
[Abstract] [Full Text]
Formation of a native-like subdomain in a partially folded intermediate of bovine pancreatic trypsin inhibitor.
Staley, J. P. & Kim, P. S. 
Protein Science 1994, 3:1822-1832.
[Abstract]
Complete folding of bovine pancreatic trypsin inhibitor with only a single disulfide bond. 
Staley, J. P. & Kim, P. S. 
Proc. Natl. Acad. Sci. USA 1992, 89:1519-1523.
[Abstract] [Full Text]
Role of a subdomain in the folding of bovine pancreatic trypsin inhibitor. 
Staley, J. P. & Kim, P. S. 
Nature 1990, 344:685-688.
[Abstract]
Recent Meeting Presentations
A Genetic Analysis Of The Proofreading Activity Of Prp22 
Alissa Anderson, Prakash Koodathingal, Melissa Mefford, Jonathan Staley
12th Annual Meeting of the RNA Society (2007)
[Abstract] 
Ubiquitin Regulates Brr2p-dependent Spliceosome Dynamics 
Eliza Small, Priya Bellare, Erik Sontheimer, Jonathan Staley 
12th Annual Meeting of the RNA Society (2007)
[Abstract]
Establishing pre-mRNA splicing fidelity: a common ATP-dependent mechanism for 5' and 3' splice site cleavage?
P Koodathingal, H Maita, R Mayas, T Novak, J Piccirilli, J Staley
12th Annual Meeting of the RNA Society (2007)
[Abstract]
Genome-wide analysis of intron function in yeast
Alejandro Montenegro-Montero, Alex Plocik, Rich Wang, Christine Guthrie, Jonathan Staley
12th Annual Meeting of the RNA Society (2007)
[Abstract]
A common ATP-depenent framework for establishing pre-mRNA splicing fidelity during 5' and 3' splice site cleavage
Prakash Koodathingal, Hiroshi Maita, Rabiah Mayas, Thad Novak, Joseph Piccirilli, Jonathan Staley
Eukaryotic mRNA Processing, Cold Spring Harbor (2007)
U2/U6 helix I promotes both catalytic steps of splicing and the DExD/H-box ATPase Prp16 promotes U2/U6 helix I dynamics
Melissa Mefford, Jonathan Staley
Eukaryotic mRNA Processing, Cold Spring Harbor (2007)
Investigating a role for spliceosome disassembly factors in discard of aberrant splicing substrates
Rabiah Mayas, Hiroshi Maita, Jonathan Staley
Eukaryotic mRNA Processing, Cold Spring Harbor (2007)